BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004B04LP1|AL425224
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1799 1865 0.0
>3x_Contig1799
Length = 39855
Score = 1865 bits (933), Expect = 0.0
Identities = 952/965 (98%), Gaps = 1/965 (0%)
Strand = Plus / Minus
Query: 1 gatctcaatcatttccatgttgaaaggagccagtggagattcagtgagatattccagtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2375 gatctcaatcatttccatgttgaaaggagccagtggagattcagtgagatattccagtaa 2316
Query: 61 aatattaacagcctggtcttcaatatgcttcaagtatggttgggtgatccatgaaaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2315 aatattaacagcctggtcttcaatatgcttcaagtatggttgggtgatccatgaaaagga 2256
Query: 121 cacttcgccttgagactcgtcagcttcagggaattcgattgtcttttccttcatctcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2255 cacttcgccttgagactcgtcagcttcagggaattcgattgtcttttccttcatctcagt 2196
Query: 181 taatgattgcggtatttgagaagccggggtatcaataaaaggtctctttctctcattcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2195 taatgattgcggtatttgagaagccggggtatcaataaaaggtctctttctctcattcgc 2136
Query: 241 agtaaattctggaagctgtttatcaaaaatttccatcaattcgatcaattcttctgaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2135 agtaaattctggaagctgtttatcaaaaatttccatcaattcgatcaattcttctgaagg 2076
Query: 301 aatgttaccagtgataatcacacagcaattatctggtgtatacatttgtttatgaaattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2075 aatgttaccagtgataatcacacagcaattatctggtgtatacatttgtttatgaaattc 2016
Query: 361 tctaatttcatcgttcgtcaacacacgtaaatttggtgttaaaccaccagtctcggaccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2015 tctaatttcatcgttcgtcaacacacgtaaatttggtgttaaaccaccagtctcggaccg 1956
Query: 421 gtatccactaccttctggaaacaatagtctttgtttttctagtgttgtgataaaccatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1955 gtatccactaccttctggaaacaatagtctttgtttttctagtgttgtgataaaccatga 1896
Query: 481 ttgagattcgataccagccatttcactaaacacgacacctttatcagataaatcgtctgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1895 ttgagattcgataccagccatttcactaaacacgacacctttatcagataaatcgtctgg 1836
Query: 541 atcgatatgatacacctcggtggtacaagcatcttctgtcaaagttggaaagaacaagtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1835 atcgatatgatacacctcggtggtacaagcatcttctgtcaaagttggaaagaacaagtg 1776
Query: 601 atctaaatacactggtagaagtttcttgaaacctttccagcctgcggtttgacaaagtgt 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1775 atctaaatacactggtagaagtttcttgaaacctttccagcctgcgg-ttgacaaagtgt 1717
Query: 661 aaacgktttgatcggtggcagtycaagcatttgtatttkacatgcataggtttccagcag 720
||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 1716 aaacggtttgatcggtggcagtccaagcatttgtatttgacatgcataggtttccagcag 1657
Query: 721 tatcgagcaaccctttgtatgggtacttctcagatcccatgaaaatcaagtgctctaagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1656 tatcgagcaaccctttgtatgggtacttctcagatcccatgaaaatcaagtgctctaagg 1597
Query: 781 tgtgaggaacaccagaatytkttkgacattytkttycaacggcaaagtaaccttktacta 840
|||||||||||||||||| | || |||||| | || |||||||||||||||||| |||||
Sbjct: 1596 tgtgaggaacaccagaatctgttggacattctgttccaacggcaaagtaaccttgtacta 1537
Query: 841 aaggtgacgacttkttatttaagtgaactagttgaagcttggtacgagttgagatgtact 900
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1536 aaggtgacgacttgttatttaagtgaactagttgaagcttggtacgagttgagatgtact 1477
Query: 901 tagtgaaatgatactgaggtgcatactcgacttcaaacgataccagtttyttgaaagtca 960
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1476 tagtgaaatgatactgaggtgcatactcgacttcaaacgataccagtttcttgaaagtca 1417
Query: 961 tgatt 965
|||||
Sbjct: 1416 tgatt 1412
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6686
Number of Sequences: 1807
Number of extensions: 6686
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)